BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012A09LP1|AL426306
(828 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1737 1620 0.0
>3x_Contig1737
Length = 17214
Score = 1620 bits (817), Expect = 0.0
Identities = 825/828 (99%)
Strand = Plus / Plus
Query: 1 cagaacattcacgacattcagcagactttcatcaagagctgtttccaacagggtaattat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1323 cagaacattcacgacattcagcagactttcatcaagagctgtttccaacagggtaattat 1382
Query: 61 ccctccaaaagcgttgactgatcttggacaacctactctcaaatcgttaaggagcgaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1383 ccctccaaaagcgttgactgatcttggacaacctactctcaaatcgttaaggagcgaata 1442
Query: 121 caagcaactaccggagaattccaatttcatcgacaagttttacaccgagttgcagaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1443 caagcaactaccggagaattccaatttcatcgacaagttttacaccgagttgcagaaatt 1502
Query: 181 ccacgatgagttcttggtgcctcgtttgaacaagcattacacggatttcgatgagaaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1503 ccacgatgagttcttggtgcctcgtttgaacaagcattacacggatttcgatgagaaccc 1562
Query: 241 tgatgatttggtgtttgaattagagaaatacatagaattacacattatcccttcacactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1563 tgatgatttggtgtttgaattagagaaatacatagaattacacattatcccttcacactc 1622
Query: 301 tgtgcgcactcagaaatcggatctgatggctcagggtattaatttgccaatggtctactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1623 tgtgcgcactcagaaatcggatctgatggctcagggtattaatttgccaatggtctactg 1682
Query: 361 tgagaccttgggtgacaagatggttatcgaaaggttcatcgagttctgtcggagtgtcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1683 tgagaccttgggtgacaagatggttatcgaaaggttcatcgagttctgtcggagtgtcag 1742
Query: 421 atacactttgcgtctgaacggtggccacagtttcatctttgatatcatgttgcaaagcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1743 atacactttgcgtctgaacggtggccacagtttcatctttgatatcatgttgcaaagcaa 1802
Query: 481 ctctgtgttccaggatttcgagaagagcaaataccagcagacgaaagagcagttaatagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1803 ctctgtgttccaggatttcgagaagagcaaataccagcagacgaaagagcagtaaatagg 1862
Query: 541 ataccccgacaagtctgctgtnataatgatgacgttctttttacataattaccaataaag 600
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1863 ataccccgacaagtctgctgtaataatgatgacgttctttttacataattaccaataaag 1922
Query: 601 tcataattggtctatagatatatatatacacaacaaataaaaggtatttctggtttatga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1923 tcataattggtctatagatatatatatacacaacaaataaaaggtatttctggtttatga 1982
Query: 661 agttatttgagagggctggtttcgtatcctatctccatttcgaactcaagtttcagatca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1983 agttatttgagagggctggtttcgtatcctatctccatttcgaactcaagtttcagatca 2042
Query: 721 tttcagtgtctcccatagtgacactgacagtgacttgaaaccatgtcttggcgaaaagaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2043 tttcagtgtctcccatagtgacactgacagtgacttgaaaccatgtcttggcgaaaagaa 2102
Query: 781 tcgcatgagactgttccgacacccagacataacaaacacccatgcatc 828
|||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2103 tcgcatgagactgtcccgacacccagacataacaaacacccatgcatc 2150
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7497
Number of Sequences: 1807
Number of extensions: 7497
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 828
length of database: 10,358,551
effective HSP length: 16
effective length of query: 812
effective length of database: 10,329,639
effective search space: 8387666868
effective search space used: 8387666868
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)